BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023F06SP1|AL428089
(1107 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 2094 0.0
3x_Contig66 616 e-176
>3x_Contig1530
Length = 6216
Score = 2094 bits (1053), Expect = 0.0
Identities = 1096/1110 (98%), Gaps = 3/1110 (0%)
Strand = Plus / Plus
Query: 1 ggtcgtactgataacbgcagcaggtctccaaggtgaacagcctctagttgatagaataat 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3865 ggtcgtactgataaccgcagcaggtctccaaggtgaacagcctctagttgatagaataat 3924
Query: 61 gtagataagggaagtcggcaaaatagatccgtaacttcgggataaggattggctctaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3925 gtagataagggaagtcggcaaaatagatccgtaacttcgggataaggattggctctaagg 3984
Query: 121 atcgggcagtgagggccttggtcagacgcggcgggcatgcttgtggactgtcttactggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3985 atcgggcagtgagggccttggtcagacgcggcgggcatgcttgtggactgtcttactggg 4044
Query: 181 cttgctcggtgggacggactgcttgcgggccttgtcgtagm-ggccttggtaggtctctt 239
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4045 cttgctcggtgggacggactgcttgcgggccttgtcgtagacggccttggtaggtctctt 4104
Query: 240 gtagaccgtcgcttgctgcaattaacgatcaacttagaactggtacggacaaggggaatc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4105 gtagaccgtcgcttgctgcaattaacgatcaacttagaactggtacggacaaggggaatc 4164
Query: 300 tgactgtctaattaaaacatagcattgcgatggtcagaaagtgatgttgacgcaatgtga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4165 tgactgtctaattaaaacatagcattgcgatggtcagaaagtgatgttgacgcaatgtga 4224
Query: 360 tttctgcccagtgctctgaatgtcaaagtgaagaaattcaaccaagcgcgggtaaacggc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4225 tttctgcccagtgctctgaatgtcaaagtgaagaaattcaaccaagcgcgggtaaacggc 4284
Query: 420 gggagtaactatgactctcttaaggtagccaaatgcctcgtcatctaattagtgacgcgc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4285 gggagtaactatgactctcttaaggtagccaaatgcctcgtcatctaattagtgacgcgc 4344
Query: 480 atgaatggattaacgagattcccactgtccctatctactatctagcgaaaccacagccaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4345 atgaatggattaacgagattcccactgtccctatctactatctagcgaaaccacagccaa 4404
Query: 540 gggaacgggcttggcagaatcagcggggaaagaagaccctgttgagcttgactctagttt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4405 gggaacgggcttggcagaatcagcggggaaagaagaccctgttgagcttgactctagttt 4464
Query: 600 gacattgtgaagagacatagagggtgtagcataagtgggagcttcggcgccagttaaata 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4465 gacattgtgaagagacatagagggtgtagcataagtgggagcttcggcgccagtgaaata 4524
Query: 660 ccactacctttatagtttctttacttattcaattaagcggastggnaattcattttccac 719
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 4525 ccactacctttatagtttctttacttattcaattaagcggagctggaattcattttccac 4584
Query: 720 gttctagcattcaaagtcctatacgggctgatccgggttgaagacattgtcaggtgggga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4585 gttctagcattcaaagtcctatacgggctgatccgggttgaagacattgtcaggtgggga 4644
Query: 780 gtttggctggggcggcacatctgttaaacgataacgcagatgtcctaagggggactcatg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4645 gtttggctggggcggcacatctgttaaacgataacgcagatgtcctaagggggactcatg 4704
Query: 840 gagaacagaaatctccagtagaacaaaagggtaaaagtccccttgattttgattttcagt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4705 gagaacagaaatctccagtagaacaaaagggtaaaagtccccttgattttgattttcagt 4764
Query: 900 gtgaatacaaaccatgaaagtgtggcctatcgatcctttaggtcctcggaatttgaggct 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4765 gtgaatacaaaccatgaaagtgtggcctatcgatcctttaggtcctcggaatttgaggct 4824
Query: 960 agaggtgccagaaaagtta-cacagggataactggcttgtggcagtyaagcgttcatagc 1018
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 4825 agaggtgccagaaaagttaccacagggataactggcttgtggcagtcaagcgttcatagc 4884
Query: 1019 gacattgctttttgattcttcgatgtcggctcttcctatcatacccgagcagaattcggt 1078
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4885 gacattgctttttgattcttcgatgtcggctcttcctatcataccgaagcagaattcggt 4944
Query: 1079 aagcgttggattg-tcacccactaawaggg 1107
||||||||||||| ||||||||||| ||||
Sbjct: 4945 aagcgttggattgttcacccactaataggg 4974
>3x_Contig66
Length = 1023
Score = 616 bits (310), Expect = e-176
Identities = 326/330 (98%), Gaps = 2/330 (0%)
Strand = Plus / Minus
Query: 1 ggtcgtactgataacbgcagcaggtctccaaggtgaacagcctctagttgatagaataat 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggtcgtactgataaccgcagcaggtctccaaggtgaacagcctctagttgatagaataat 274
Query: 61 gtagataagggaagtcggcaaaatagatccgtaacttcgggataaggattggctctaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gtagataagggaagtcggcaaaatagatccgtaacttcgggataaggattggctctaagg 214
Query: 121 atcgggcagtgagggccttggtcagacgcggcgggcatgcttgtggactgtcttactggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 atcgggcagtgagggccttggtcagacgcggcgggcatgcttgtggactgtcttactggg 154
Query: 181 cttgctcggtgggacggactgcttgcgggccttgtcgtag-mggccttggtaggtctctt 239
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 153 cttgctcggtgggacggactgcttgcgggccttgtcgtagacggccttggtaggtctctt 94
Query: 240 gtagaccgtcgcttgctgcaattaacgatcaacttagaactggtacgga-caaggggaat 298
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 93 gtagaccgtcgcttgctgcaattaacgatcaacttagaactggtacggaccaaggggaat 34
Query: 299 ctgactgtctaattaaaacatagcattgcg 328
||||||||||||||||||||||||||||||
Sbjct: 33 ctgactgtctaattaaaacatagcattgcg 4
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4845
Number of Sequences: 1807
Number of extensions: 4845
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 2
length of query: 1107
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1091
effective length of database: 10,329,639
effective search space: 11269636149
effective search space used: 11269636149
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)